Deep Dive – What’s in a Stool Test and Why It Matters.
- Tania Mercuri

- Jul 30
- 2 min read
Updated: Aug 6

When it comes to understanding your gut health, a comprehensive stool test is one of the most underused, yet powerful tools available. While many people associate stool testing with checking for parasites or infections, functional testing goes far beyond that. It offers an in-depth look at your gut microbiome, digestive capacity, inflammation, and even the integrity of your gut lining.
As a gut health nutritionist, I use stool testing to stop the guesswork and uncover the real reasons behind symptoms like:
Chronic bloating and gas
Constipation or loose stools
Fatigue and brain fog
Skin conditions like eczema or psoriasis
Food sensitivities
Unexplained inflammation
Hormone and immune imbalances
Let’s break down what a comprehensive stool test really shows us—and why it’s a game changer for personalized nutrition and wellness.
What’s Actually in a Stool Test?
A quality stool test (like the Gut Scan or Deep Gut Test I use with clients) gives you key insights, including:
Microbiome Diversity
Your gut is home to trillions of bacteria. A healthy microbiome has a wide variety of species. Low diversity is often linked with inflammation, IBS, metabolic issues, and even mood disorders.
Beneficial vs. Opportunistic Bacteria
We look at levels of helpful bacteria (like Faecalibacterium prausnitzii or Akkermansia) as well as overgrowths of problematic ones (such as Bilophila wadsworthia, Streptococcus, or Klebsiella). These patterns help explain symptoms like bloating, gas, or frequent infections.
Digestive Function
We assess enzyme output, fat and protein digestion, and short-chain fatty acid (SCFA) production. These are critical for nutrient absorption, energy, and regulating inflammation.
Pathogens, Yeast & Parasites
Even low-grade infections or yeast overgrowth can cause stubborn symptoms like diarrhea, constipation, fatigue, and poor immune function.
Leaky Gut Markers
These may indicate that your gut lining is compromised—allowing food particles and toxins into your bloodstream. This is known as increased intestinal permeability, or “leaky gut.”
Why Stool Testing Matters
As we move through perimenopause and beyond, gut health becomes even more critical. Hormonal fluctuations affect the microbiome—and vice versa. Your gut helps detoxify estrogen, regulate cortisol, and support thyroid health. If you’re in midlife and dealing with symptoms that feel “suddenly new,” your gut may be the missing link.
This is especially important if:
You’re feeling bloated even after healthy meals
You’re reacting to foods you used to tolerate
You’re tired, inflamed, or just don’t feel like yourself
You’ve “tried everything” and still have symptoms
Testing Leads to Targeted Action
With detailed stool testing, we can:
Build a personalized nutrition plan that supports your microbiome
Recommend targeted supplements (no more guessing)
Address inflammation and leaky gut
Restore digestive function and regularity
Reduce bloating, fatigue, skin issues, and more
Ready to Finally Get Some Answers?
If you’re tired of symptom-chasing and want a science-backed path forward, it might be time to test—not guess.
Ready to Personalize Your Gut Health Plan?
As a certified gut health nutritionist, I offer personalized consultations, gut microbiome testing, and holistic strategies to help you feel better from the inside out.
Or reach out to learn more about my programs for gut inflammation, microbiome support, and digestive health. www.taniamercuri.com
To your healing,
Tania Mercuri
CNP, NNCP, RNT Nutritionist for Gut Health & Midlife






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